Uses of Annotation Interface
com.atgenomix.seqslab.piper.tags.DeveloperApi

Packages that use DeveloperApi

Package	Description
com.atgenomix.seqslab.piper.plugin.api
com.atgenomix.seqslab.piper.plugin.api.collector
com.atgenomix.seqslab.piper.plugin.api.executor
com.atgenomix.seqslab.piper.plugin.api.formatter
com.atgenomix.seqslab.piper.plugin.api.loader
com.atgenomix.seqslab.piper.plugin.api.transformer
com.atgenomix.seqslab.piper.plugin.api.writer

Uses of DeveloperApi in com.atgenomix.seqslab.piper.plugin.api

Classes in com.atgenomix.seqslab.piper.plugin.api with annotations of type DeveloperApi

Modifier and Type	Class	Description
class	DataSource	The main interface responsible for representing an accessible data source in SeqsLab.
interface	Operator	An operator that processes Spark DataFrame and produces a new DataFrame.
interface	Pipeline	An interface represents a complete configuration of workflow task including input parameters, dataset connection, as well as localization, computation, and delocalization workload processes.
interface	PipelineTask	An interface represents the localization, computation, and delocalization workload processes in a pipeline task of a given variable identified by FQN (Fully Qualified Name).
interface	PiperPlugin	A plugin that can be dynamically loaded into a SeqsLab piper application.
interface	PiperValue	An interface represents value of primitive types, e.g.

Uses of DeveloperApi in com.atgenomix.seqslab.piper.plugin.api.collector

Classes in com.atgenomix.seqslab.piper.plugin.api.collector with annotations of type DeveloperApi

Modifier and Type	Interface	Description
interface	Collector	The operator responsible for retrieving command outputs from local file system and returning a DataFrame.
interface	CollectorSupport	Factory object responsible for creating Collector operators.
interface	SupportsAggregation	A mix-in interface for Collector.
interface	SupportsRepartitioning	A mix-in interface for Collector.

Uses of DeveloperApi in com.atgenomix.seqslab.piper.plugin.api.executor

Classes in com.atgenomix.seqslab.piper.plugin.api.executor with annotations of type DeveloperApi

Modifier and Type	Interface	Description
interface	Executor	The operator responsible for preprocessing (localizing) input dataframe as a managed table for Spark SQL command or saving to local files for shell script execution.
interface	ExecutorSupport	Factory object responsible for creating Executor operators.
interface	SupportsFileLocalization	A mix-in interface for Executor.
interface	SupportsTableLocalization	A mix-in interface for Executor.

Uses of DeveloperApi in com.atgenomix.seqslab.piper.plugin.api.formatter

Classes in com.atgenomix.seqslab.piper.plugin.api.formatter with annotations of type DeveloperApi

Modifier and Type	Interface	Description
interface	Formatter	An operator responsible for formatting input datasets, such as converting schema, adding or deleting columns, and encoding domain specific object.
interface	FormatterSupport	Factory object responsible for creating Formatter operators.
interface	SupportsUDF1<T1,R>	A mix-in interface for Formatter.
interface	SupportsUDF2<T1,T2,R>	A mix-in interface for Formatter.
interface	SupportsUDF3<T1,T2,T3,R>	A mix-in interface for Formatter.
interface	SupportsUDF4<T1,T2,T3,T4,R>	A mix-in interface for Formatter.
interface	SupportsUDF5<T1,T2,T3,T4,T5,R>	A mix-in interface for Formatter.

Uses of DeveloperApi in com.atgenomix.seqslab.piper.plugin.api.loader

Classes in com.atgenomix.seqslab.piper.plugin.api.loader with annotations of type DeveloperApi

Modifier and Type	Interface	Description
interface	Loader	The operator responsible for loading (reading) a dataset into in-memory DataFrame or copying to local host file system from a specific data source, e.g.
interface	LoaderSupport	Factory object responsible for creating Loader operators.
interface	SupportsCopyToLocal	A mix-in interface for Loader.
interface	SupportsHadoopDFS	A mix-in interface for Loader.
interface	SupportsReadPartitions	A mix-in interface for Loader.
interface	SupportsScanPartitions	A mix-in interface for Loader.

Uses of DeveloperApi in com.atgenomix.seqslab.piper.plugin.api.transformer

Classes in com.atgenomix.seqslab.piper.plugin.api.transformer with annotations of type DeveloperApi

Modifier and Type	Interface	Description
interface	SupportsGroupWithinPartitions	A mix-in interface for Transformer.
interface	SupportsOrdering	A mix-in interface for Transformer.
interface	Transformer	The operator responsible for repartitioning, and additionally sorting, DataFrames loaded by Loader to optimize downstream data processing.
interface	TransformerSupport	Factory object responsible for creating Transformer operators.

Uses of DeveloperApi in com.atgenomix.seqslab.piper.plugin.api.writer

Classes in com.atgenomix.seqslab.piper.plugin.api.writer with annotations of type DeveloperApi

Modifier and Type	Interface	Description
interface	SupportsSaveToBLOB	The mix-in interface for Writer.
interface	SupportsSaveToHTTP	The mix-in interface for Writer.
interface	SupportsSaveToJDBC	The mix-in interface for Writer.
interface	Writer	The operator responsible for delocalizing/saving command output DataFrame to storage or repositories, e.g.
interface	WriterSupport	Factory object responsible for creating Writer operators.