Index

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O

Operator - Interface in com.atgenomix.seqslab.piper.plugin.api

An operator that processes Spark DataFrame and produces a new DataFrame.

OperatorContext - Class in com.atgenomix.seqslab.piper.plugin.api

An object used in pipeline operations to represent a persistent set of properties, inputs, and outputs.

OperatorContext(Map<String, Object>) - Constructor for class com.atgenomix.seqslab.piper.plugin.api.OperatorContext

Creates an operator context with the specified defaults.

OperatorContext(Map<String, Object>, Map<String, PiperValue>) - Constructor for class com.atgenomix.seqslab.piper.plugin.api.OperatorContext

Creates an operator context with the specified defaults and task inputs.

OperatorContext(Map<String, Object>, Map<String, PiperValue>, Map<String, PiperValue>) - Constructor for class com.atgenomix.seqslab.piper.plugin.api.OperatorContext

Creates an operator context with the specified defaults and task inputs and outputs.

OperatorPipelineV3 - Interface in com.atgenomix.seqslab.piper.plugin.api

The base contract interface for SeqsLab operator pipeline v3.

outputs - Variable in class com.atgenomix.seqslab.piper.plugin.api.OperatorContext

An immutable map that contains NamedValue task output variables and files.

A B C D E F G I L N O P R S T V W
All Classes and Interfaces|All Packages|Serialized Form