Index

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C

Collector - Interface in com.atgenomix.seqslab.piper.plugin.api.collector

The operator responsible for retrieving command outputs from local file system and returning a DataFrame.

CollectorSupport - Interface in com.atgenomix.seqslab.piper.plugin.api.collector

Factory object responsible for creating Collector operators.

com.atgenomix.seqslab.piper.plugin.api - package com.atgenomix.seqslab.piper.plugin.api

com.atgenomix.seqslab.piper.plugin.api.collector - package com.atgenomix.seqslab.piper.plugin.api.collector

com.atgenomix.seqslab.piper.plugin.api.executor - package com.atgenomix.seqslab.piper.plugin.api.executor

com.atgenomix.seqslab.piper.plugin.api.formatter - package com.atgenomix.seqslab.piper.plugin.api.formatter

com.atgenomix.seqslab.piper.plugin.api.loader - package com.atgenomix.seqslab.piper.plugin.api.loader

com.atgenomix.seqslab.piper.plugin.api.transformer - package com.atgenomix.seqslab.piper.plugin.api.transformer

com.atgenomix.seqslab.piper.plugin.api.writer - package com.atgenomix.seqslab.piper.plugin.api.writer

com.atgenomix.seqslab.piper.tags - package com.atgenomix.seqslab.piper.tags

createCollector(PluginContext, OperatorContext) - Method in interface com.atgenomix.seqslab.piper.plugin.api.collector.CollectorSupport

Returns a collector operator with specific plugin context and operator context that is created and initialized by SeqsLab workflow engine.

createExecutor(PluginContext, OperatorContext) - Method in interface com.atgenomix.seqslab.piper.plugin.api.executor.ExecutorSupport

Returns an executor operator with specific plugin context and operator context that is created and initialized by SeqsLab workflow engine.

createFormatter(PluginContext, OperatorContext) - Method in interface com.atgenomix.seqslab.piper.plugin.api.formatter.FormatterSupport

Returns a formatter operator with specific plugin context and operator context that is created and initialized by SeqsLab workflow engine.

createLoader(PluginContext, OperatorContext) - Method in interface com.atgenomix.seqslab.piper.plugin.api.loader.LoaderSupport

Returns a loader operator with specific plugin context and operator context that is created and initialized by SeqsLab workflow engine.

createTransformer(PluginContext, OperatorContext) - Method in interface com.atgenomix.seqslab.piper.plugin.api.transformer.TransformerSupport

Returns a transformer operator with specific plugin context and operator context that is created and initialized by SeqsLab workflow engine.

createWriter(PluginContext, OperatorContext) - Method in interface com.atgenomix.seqslab.piper.plugin.api.writer.WriterSupport

Returns a writer operator with specific plugin context and operator context that is created and initialized by SeqsLab workflow engine.

A B C D E F G I L N O P R S T V W
All Classes and Interfaces|All Packages|Serialized Form